Another same issue, but on Ubuntu 8.04 und using VLC to play not only flv format.
Using it succefully until the last Ubuntu official security updates dated Tue Apr 20 that cames out with:
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Commit Log for Tue Apr 20 17:01:36 2010
Updated following packets:
ffmpeg (3:0.cvs20070307-5ubuntu7.3) to 3:0.cvs20070307-5ubuntu7.4
libavcodec1d (3:0.cvs20070307-5ubuntu7.3) to 3:0.cvs20070307-5ubuntu7.4
libavformat1d (3:0.cvs20070307-5ubuntu7.3) to 3:0.cvs20070307-5ubuntu7.4
libpostproc1d (3:0.cvs20070307-5ubuntu7.3) to 3:0.cvs20070307-5ubuntu7.4
libswscale1d (3:0.cvs20070307-5ubuntu7.3) to 3:0.cvs20070307-5ubuntu7.4
libavutil1d (3:0.cvs20070307-5ubuntu7.3) to 3:0.cvs20070307-5ubuntu7.4
After that, there are no more audio playing on FLVs.
Running VLC from shell, output is:
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$ vlc
VLC media player 0.8.6e Janus
[00000382] ffmpeg decoder error: cannot open codec (MPEG Audio layer 1/2/3)
[00000382] main decoder error: no suitable decoder module for fourcc `mp3 '.
VLC probably does not support this sound or video format.
[00000284] main playlist: stopping playback
Important to comment that in this same period I updated adobe Flash player from version 9.x to the last 10.0.45.2
I don't be shure if there is some connection or interaction between them.
Any way, MP3 audio files and FLVs with codec MPEG-4 AAC audio are still playables.
Thanks for your advice.